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Mesh2D_DEM_SaddleStarter.h
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50 
51 // This code is based on the algorithm presented in the paper:
52 // “Parallel Peak Pruning for Scalable SMP Contour Tree Computation.”
53 // Hamish Carr, Gunther Weber, Christopher Sewell, and James Ahrens.
54 // Proceedings of the IEEE Symposium on Large Data Analysis and Visualization
55 // (LDAV), October 2016, Baltimore, Maryland.
56 
57 //=======================================================================================
58 //
59 // COMMENTS:
60 //
61 // This functor replaces a parallel loop examining neighbours - again, for arbitrary
62 // meshes, it needs to be a reduction, but for regular meshes, it's faster this way.
63 //
64 // Any vector needed by the functor for lookup purposes will be passed as a parameter to
65 // the constructor and saved, with the actual function call being the operator ()
66 //
67 // Vectors marked I/O are intrinsically risky unless there is an algorithmic guarantee
68 // that the read/writes are completely independent - which for our case actually occurs
69 // The I/O vectors should therefore be justified in comments both here & in caller
70 //
71 //=======================================================================================
72 
73 #ifndef vtkm_worklet_contourtree_mesh2d_dem_saddle_starter_h
74 #define vtkm_worklet_contourtree_mesh2d_dem_saddle_starter_h
75 
78 
79 namespace vtkm
80 {
81 namespace worklet
82 {
83 namespace contourtree
84 {
85 
86 // Worklet for setting initial chain maximum value
88 {
89 public:
91 
92  using ControlSignature = void(FieldIn vertex, // (input) index into active vertices
93  FieldIn outDegFirstEdge, // (input) out degree/first edge of vertex
94  FieldIn valueIndex, // (input) index into regular graph
95  WholeArrayIn linkMask, // (input) neighbors of vertex
96  WholeArrayIn arcArray, // (input) chain extrema per vertex
97  WholeArrayIn inverseIndex, // (input) permutation of index
98  WholeArrayOut edgeNear, // (output) low end of edges
99  WholeArrayOut edgeFar, // (output) high end of edges
100  WholeArrayOut activeEdges); // (output) active edge list
101  using ExecutionSignature = void(_1, _2, _3, _4, _5, _6, _7, _8, _9);
102  using InputDomain = _1;
103 
104  vtkm::Id nRows; // (input) number of rows in 2D
105  vtkm::Id nCols; // (input) number of cols in 2D
106  bool ascending; // (input) ascending or descending (join or split)
107 
108  // Constructor
110  Mesh2D_DEM_SaddleStarter(vtkm::Id NRows, vtkm::Id NCols, bool Ascending)
111  : nRows(NRows)
112  , nCols(NCols)
113  , ascending(Ascending)
114  {
115  }
116 
117  // operator() routine that executes the loop
118  template <typename InFieldPortalType, typename OutFieldPortalType>
119  VTKM_EXEC void operator()(const vtkm::Id& vertex,
120  const vtkm::Pair<vtkm::Id, vtkm::Id>& outDegFirstEdge,
121  const vtkm::Id& valueIndex,
122  const InFieldPortalType& linkMask,
123  const InFieldPortalType& arcArray,
124  const InFieldPortalType& inverseIndex,
125  const OutFieldPortalType& edgeNear,
126  const OutFieldPortalType& edgeFar,
127  const OutFieldPortalType& activeEdges) const
128  {
129  vtkm::Id outdegree = outDegFirstEdge.first;
130  vtkm::Id firstEdge = outDegFirstEdge.second;
131  // skip local extrema
132  if (outdegree == 0)
133  return;
134 
135  // get the saddle mask for the vertex
136  vtkm::Id nbrMask = linkMask.Get(valueIndex);
137 
138  // get the row and column
139  vtkm::Id row = VERTEX_ROW(valueIndex, nCols);
140  vtkm::Id col = VERTEX_COL(valueIndex, nCols);
141 
142  // we now know which edges are starts, so we count to get the outdegree
143  vtkm::Id outDegree = 0;
144  vtkm::Id farEnds[MAX_OUTDEGREE];
145 
146  // copy into the temporary array
147  if ((nbrMask & 0x30) == 0x20)
148  farEnds[outDegree++] = inverseIndex.Get(arcArray.Get(VERTEX_ID(row - 1, col, nCols)));
149  if ((nbrMask & 0x18) == 0x10)
150  farEnds[outDegree++] = inverseIndex.Get(arcArray.Get(VERTEX_ID(row - 1, col - 1, nCols)));
151  if ((nbrMask & 0x0C) == 0x08)
152  farEnds[outDegree++] = inverseIndex.Get(arcArray.Get(VERTEX_ID(row, col - 1, nCols)));
153  if ((nbrMask & 0x06) == 0x04)
154  farEnds[outDegree++] = inverseIndex.Get(arcArray.Get(VERTEX_ID(row + 1, col, nCols)));
155  if ((nbrMask & 0x03) == 0x02)
156  farEnds[outDegree++] = inverseIndex.Get(arcArray.Get(VERTEX_ID(row + 1, col + 1, nCols)));
157  if ((nbrMask & 0x21) == 0x01)
158  farEnds[outDegree++] = inverseIndex.Get(arcArray.Get(VERTEX_ID(row, col + 1, nCols)));
159 
160  // now we check them against each other
161  if ((outDegree == 2) && (farEnds[0] == farEnds[1]))
162  { // outDegree 2 & both match
163  // treat as a regular point
164  outDegree = 1;
165  } // outDegree 2 & both match
166  else if (outDegree == 3)
167  { // outDegree 3
168  if (farEnds[0] == farEnds[1])
169  { // first two match
170  if (farEnds[0] == farEnds[2])
171  { // triple match
172  // all match - treat as regular point
173  outDegree = 1;
174  } // triple match
175  else
176  { // first two match, but not third
177  // copy third down one place
178  farEnds[1] = farEnds[2];
179  // and reset the count
180  outDegree = 2;
181  } //
182  } // first two match
183  else if ((farEnds[0] == farEnds[2]) || (farEnds[1] == farEnds[2]))
184  { // second one matches either of the first two
185  // decrease the count, keeping 0 & 1
186  outDegree = 2;
187  } // second one matches either of the first two
188  } // outDegree 3
189 
190  // now the farEnds array holds the far ends we can reach
191  for (vtkm::Id edge = 0; edge < outDegree; edge++)
192  {
193  // compute the edge index in the edge arrays
194  vtkm::Id edgeID = firstEdge + edge;
195 
196  // now set the near and far ends and save the edge itself
197  edgeNear.Set(edgeID, vertex);
198  edgeFar.Set(edgeID, farEnds[edge]);
199  activeEdges.Set(edgeID, edgeID);
200  } // per start
201  } // operator()
202 
203 }; // Mesh2D_DEM_SaddleStarter
204 }
205 }
206 }
207 
208 #endif
vtkm::worklet::contourtree::Mesh2D_DEM_SaddleStarter::ExecutionSignature
void(_1, _2, _3, _4, _5, _6, _7, _8, _9) ExecutionSignature
Definition: Mesh2D_DEM_SaddleStarter.h:101
VTKM_EXEC
#define VTKM_EXEC
Definition: ExportMacros.h:51
vtkm
Groups connected points that have the same field value.
Definition: Atomic.h:19
Mesh2D_DEM_Triangulation_Macros.h
VERTEX_COL
#define VERTEX_COL(V, NCOLS)
Definition: Mesh2D_DEM_Triangulation_Macros.h:82
WorkletMapField.h
VTKM_EXEC_CONT
#define VTKM_EXEC_CONT
Definition: ExportMacros.h:52
vtkm::worklet::contourtree::Mesh2D_DEM_SaddleStarter::ControlSignature
void(FieldIn vertex, FieldIn outDegFirstEdge, FieldIn valueIndex, WholeArrayIn linkMask, WholeArrayIn arcArray, WholeArrayIn inverseIndex, WholeArrayOut edgeNear, WholeArrayOut edgeFar, WholeArrayOut activeEdges) ControlSignature
Definition: Mesh2D_DEM_SaddleStarter.h:100
vtkm::Id
vtkm::Int32 Id
Represents an ID (index into arrays).
Definition: Types.h:191
MAX_OUTDEGREE
#define MAX_OUTDEGREE
Definition: Mesh2D_DEM_Triangulation_Macros.h:76
vtkm::worklet::contourtree::Mesh2D_DEM_SaddleStarter::InputDomain
_1 InputDomain
Definition: Mesh2D_DEM_SaddleStarter.h:102
vtkm::worklet::contourtree::Mesh2D_DEM_SaddleStarter::operator()
VTKM_EXEC void operator()(const vtkm::Id &vertex, const vtkm::Pair< vtkm::Id, vtkm::Id > &outDegFirstEdge, const vtkm::Id &valueIndex, const InFieldPortalType &linkMask, const InFieldPortalType &arcArray, const InFieldPortalType &inverseIndex, const OutFieldPortalType &edgeNear, const OutFieldPortalType &edgeFar, const OutFieldPortalType &activeEdges) const
Definition: Mesh2D_DEM_SaddleStarter.h:119
vtkm::worklet::WorkletMapField::FieldIn
A control signature tag for input fields.
Definition: WorkletMapField.h:49
vtkm::Pair::first
FirstType first
The pair's first object.
Definition: Pair.h:50
vtkm::worklet::contourtree::Mesh2D_DEM_SaddleStarter
Definition: Mesh2D_DEM_SaddleStarter.h:87
vtkm::worklet::contourtree::Mesh2D_DEM_SaddleStarter::Mesh2D_DEM_SaddleStarter
VTKM_EXEC_CONT Mesh2D_DEM_SaddleStarter(vtkm::Id NRows, vtkm::Id NCols, bool Ascending)
Definition: Mesh2D_DEM_SaddleStarter.h:110
VERTEX_ROW
#define VERTEX_ROW(V, NCOLS)
Definition: Mesh2D_DEM_Triangulation_Macros.h:79
vtkm::worklet::contourtree::Mesh2D_DEM_SaddleStarter::nCols
vtkm::Id nCols
Definition: Mesh2D_DEM_SaddleStarter.h:105
VERTEX_ID
#define VERTEX_ID(R, C, NCOLS)
Definition: Mesh2D_DEM_Triangulation_Macros.h:85
vtkm::List
Definition: List.h:34
vtkm::worklet::contourtree::Mesh2D_DEM_SaddleStarter::nRows
vtkm::Id nRows
Definition: Mesh2D_DEM_SaddleStarter.h:104
vtkm::Pair
A vtkm::Pair is essentially the same as an STL pair object except that the methods (constructors and ...
Definition: Pair.h:29
vtkm::Pair::second
SecondType second
The pair's second object.
Definition: Pair.h:55
vtkm::worklet::WorkletMapField
Base class for worklets that do a simple mapping of field arrays.
Definition: WorkletMapField.h:38
vtkm::worklet::contourtree::Mesh2D_DEM_SaddleStarter::ascending
bool ascending
Definition: Mesh2D_DEM_SaddleStarter.h:106